Transcript: lnc-CLDN19-2:3

Basic information

LNCipedia transcript ID: lnc-CLDN19-2:3 
LNCipedia gene ID: lnc-CLDN19-2
Location (hg38): chr1:42746531-42747576
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 646 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT002748
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 197.6351 coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLDN19-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLDN19-2:3
4.0 lnc-CLDN19-2:3
4.1 lnc-CLDN19-2:3
5.0 lnc-CLDN19-2:3
5.1 lnc-CLDN19-2:3
5.2 lnc-CLDN19-2:3