Transcript: lnc-CLDN23-1:9

Basic information

LNCipedia transcript ID: lnc-CLDN23-1:9 
LNCipedia gene ID: lnc-CLDN23-1
Location (hg38): chr8:8555264-8577653
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8140 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000097865.1|MICT00000338511.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.0743 non-coding 
CPAT coding probability 2.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDN23-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLDN23-1:9
5.0 lnc-CLDN23-1:9
5.1 lnc-DEFB106A-14:4
5.2 lnc-CLDN23-1:9