Transcript: lnc-CLDN25-3:1

Basic information

LNCipedia transcript ID: lnc-CLDN25-3:1 
LNCipedia gene ID: lnc-CLDN25-3
Location (hg38): chr11:113789231-113791160
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1930 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT024258
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 203.4357 coding 
CPAT coding probability 92.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLDN25-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLDN25-3:1
4.0 lnc-CLDN25-3:1
4.1 lnc-CLDN25-3:1
5.0 lnc-CLDN25-3:1
5.1 lnc-PTS-32:1
5.2 lnc-CLDN25-3:1