Transcript: lnc-CLDND2-1:1

Basic information

LNCipedia transcript ID: lnc-CLDND2-1:1 
LNCipedia gene ID: lnc-CLDND2-1
Ensembl Gene ID: ENSG00000268520
Ensembl Transcript ID: ENST00000595500
Location (hg38): chr19:51361712-51365544
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 473 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067435; ENST00000595500.1
Alternative gene names: ENSG00000268520.1; CTD-2616J11.10; AC008750.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.7363 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLDND2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLDND2-1:1
4.0 lnc-CLDND2-1:1
4.1 lnc-CLDND2-1:1
5.0 lnc-CLDND2-1:1
5.1 lnc-FAM71E1-38:1
5.2 lnc-CLDND2-1:1