Transcript: lnc-CLEC16A-7:4

Basic information

LNCipedia transcript ID: lnc-CLEC16A-7:4 
LNCipedia gene ID: lnc-CLEC16A-7
Location (hg38): chr16:11196619-11224641
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 596 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024807; NONHSAT140556
Alternative gene names: XLOC_011645; linc-C16orf75


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3349 non-coding 
CPAT coding probability 3.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC16A-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLEC16A-1:1
3.1 lnc-CLEC16A-2:2
4.0 lnc-CLEC16A-2:2
4.1 lnc-CLEC16A-2:2
5.0 lnc-CLEC16A-2:2
5.1 lnc-PDXDC1-46:4
5.2 lnc-CLEC16A-7:4