Transcript: lnc-CLEC18B-8:1

Basic information

LNCipedia transcript ID: lnc-CLEC18B-8:1 
LNCipedia gene ID: lnc-CLEC18B-8
Ensembl Gene ID: ENSG00000275236
Ensembl Transcript ID: ENST00000616116
Location (hg38): chr16:74289593-74291052
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1460 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616116.1
Alternative gene names: ENSG00000275236.1; AC009120.11; AC009120.6; AC009120.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.1433 non-coding 
CPAT coding probability 8.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC18B-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CLEC18B-8:1
4.1 lnc-CLEC18B-8:1
5.0 lnc-CLEC18B-8:1
5.1 lnc-MLKL-17:1
5.2 lnc-CLEC18B-8:1