Transcript: lnc-CLEC2B-1:2

Basic information

LNCipedia transcript ID: lnc-CLEC2B-1:2 
LNCipedia gene ID: lnc-CLEC2B-1
Location (hg38): chr12:9827856-9834708
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 915 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001qwo_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.9152 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC2B-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLEC2B-1:2
4.0 lnc-CLEC2B-1:2
4.1 lnc-CLEC2B-1:2
5.0 lnc-CLEC2B-1:2
5.1 lnc-M6PR-26:2
5.2 lnc-CLEC2B-1:2