Transcript: lnc-CLEC3A-12:1

Basic information

LNCipedia transcript ID: lnc-CLEC3A-12:1 
LNCipedia gene ID: lnc-CLEC3A-12
Location (hg38): chr16:78825281-78826006
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 726 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT143830
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 62.0949 coding 
CPAT coding probability 36.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLEC3A-12:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLEC3A-12:1
4.0 lnc-CLEC3A-12:1
4.1 lnc-CLEC3A-12:1
5.0 lnc-CLEC3A-12:1
5.1 lnc-CRISPLD2-92:1
5.2 lnc-CLEC3A-12:1