Transcript: lnc-CLEC3A-14:1

Basic information

LNCipedia transcript ID: lnc-CLEC3A-14:1 
LNCipedia gene ID: lnc-CLEC3A-14
Ensembl Gene ID: ENSG00000276007
Ensembl Transcript ID: ENST00000612986
Location (hg38): chr16:78123243-78124332
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1090 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612986.1
Alternative gene names: ENSG00000276007.1; RP11-358L22.3; AC079414.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.822 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLEC3A-14:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CLEC3A-14:1
4.1 lnc-CLEC3A-14:1
5.0 lnc-CLEC3A-14:1
5.1 lnc-MARVELD3-98:1
5.2 lnc-CLEC3A-14:1