Transcript: lnc-CLIC2-1:3

Basic information

LNCipedia transcript ID: lnc-CLIC2-1:3 
LNCipedia gene ID: lnc-CLIC2-1
RefSeq ID: NR_109985
Location (hg38): chrX:155347137-155374174
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1702 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT139233; NR_039991; NR_109985; NR_109985.1
Alternative gene names: LOC101927830


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.9595 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLIC2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLIC2-1:3
4.0 lnc-CLIC2-1:3
4.1 lnc-CLIC2-1:3
5.0 lnc-CLIC2-1:3
5.1 lnc-SMIM9-11:1
5.2 lnc-CLIC2-1:3