Transcript: lnc-CLIC4-6:1

Basic information

LNCipedia transcript ID: lnc-CLIC4-6:1 
LNCipedia gene ID: lnc-CLIC4-6
Ensembl Gene ID: ENSG00000284699
Ensembl Transcript ID: ENST00000641176
Location (hg38): chr1:24704894-24717596
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 886 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641176.1
Alternative gene names: ENSG00000284699.1; AL445648.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -129.2779 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLIC4-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SRRM1-6:1
5.1 lnc-SRRM1-6:1
5.2 lnc-CLIC4-6:1