Transcript: lnc-CLK1-6:1

Basic information

LNCipedia transcript ID: lnc-CLK1-6:1 
LNCipedia gene ID: lnc-CLK1-6
Location (hg38): chr2:200795062-200795358
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 297 bp
Exons: 1
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_18125_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.0311 non-coding 
CPAT coding probability 36.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLK1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLK1-6:1
4.0 lnc-CLK1-6:1
4.1 lnc-CLK1-6:1
5.0 lnc-CLK1-6:1
5.1 lnc-HSPD1-48:1
5.2 lnc-CLK1-6:1