Transcript: lnc-CLK4-2:6

Basic information

LNCipedia transcript ID: lnc-CLK4-2:6 
LNCipedia gene ID: lnc-CLK4-2
Location (hg38): chr5:178616882-178620119
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 572 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT105538
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 374.3328 coding 
CPAT coding probability 37.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CLK4-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COL23A1-2:5
4.0 lnc-CLK4-2:6
4.1 lnc-CLK4-2:6
5.0 lnc-CLK4-2:6
5.1 lnc-PDLIM7-47:5
5.2 lnc-CLK4-2:6