Transcript: lnc-CLN6-1:8

Basic information

LNCipedia transcript ID: lnc-CLN6-1:8 
LNCipedia gene ID: lnc-CLN6-1
Location (hg38): chr15:68277707-68277935
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 229 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260657.1|FTMT25800002500.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.8101 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLN6-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CLN6-1:8
5.0 lnc-CLN6-1:8
5.1 lnc-CLN6-1:8
5.2 lnc-CLN6-1:8