Transcript: lnc-CLUAP1-7:1

Basic information

LNCipedia transcript ID: lnc-CLUAP1-7:1 
LNCipedia gene ID: lnc-CLUAP1-7
Location (hg38): chr16:3616090-3617360
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 566 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000571433.1; RP11-461A8.2-001; OTTHUMT00000438004.1; NONHSAT148062
Alternative gene names: ENSG00000262012.1; RP11-461A8.2; OTTHUMG00000177600.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.4902 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLUAP1-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNASE1-1:1
4.0 lnc-DNASE1-1:1
4.1 lnc-DNASE1-1:1
5.0 lnc-DNASE1-1:1
5.1 lnc-THOC6-23:1
5.2 lnc-CLUAP1-7:1