Transcript: lnc-CLVS1-1:5

Basic information

LNCipedia transcript ID: lnc-CLVS1-1:5 
LNCipedia gene ID: lnc-CLVS1-1
Location (hg38): chr8:61023466-61027465
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 355 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014727; NONHSAT126859
Alternative gene names: XLOC_006815; linc-CLVS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.7186 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLVS1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLVS1-1:5
3.1 lnc-CLVS1-1:5
4.0 lnc-CLVS1-1:5
4.1 lnc-CLVS1-1:5
5.0 lnc-CLVS1-1:5
5.1 lnc-SDCBP-41:7
5.2 lnc-CLVS1-1:5