Transcript: lnc-CMC2-1:3

Basic information

LNCipedia transcript ID: lnc-CMC2-1:3 
LNCipedia gene ID: lnc-CMC2-1
Location (hg38): chr16:81020440-81035754
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1189 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260213.1|FTMT26100016208.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -63.5754 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMC2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C16orf61-1:6
5.0 lnc-C16orf61-1:6
5.1 lnc-MAF-17:3
5.2 lnc-CMC2-1:3