Transcript: lnc-CMPK2-19:1

Basic information

LNCipedia transcript ID: lnc-CMPK2-19:1 
LNCipedia gene ID: lnc-CMPK2-19
Location (hg38): chr2:6566554-6568023
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 746 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1755_chr2:6706685-6708155_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.8624 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMPK2-19:1
4.0 lnc-CMPK2-19:1
4.1 lnc-CMPK2-19:1
5.0 lnc-CMPK2-19:1
5.1 lnc-RAD51AP2-156:1
5.2 lnc-CMPK2-19:1