Transcript: lnc-CMPK2-5:49

Basic information

LNCipedia transcript ID: lnc-CMPK2-5:49 
HGNC Gene Symbol: lnc-CMPK2-5    
HGNC Full Gene Name: MIR7515 host gene
Ensembl Gene ID: ENSG00000236172
Ensembl Transcript ID: ENST00000590276
Location (hg38): chr2:6618077-6635174
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 742 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068859; ENST00000590276.1; ENST00000590276.5
Alternative gene names: ENSG00000236172.2; hsa-mir-7515; ENSG00000236172.6; MIR7515HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -403.4254 non-coding 
CPAT coding probability 4.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-5:49 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMPK2-5:49
4.0 lnc-CMPK2-5:49
4.1 lnc-CMPK2-5:49
5.0 lnc-CMPK2-5:49
5.1 lnc-RAD51AP2-155:68
5.2 lnc-CMPK2-5:49