Transcript: lnc-CMPK2-5:51

Basic information

LNCipedia transcript ID: lnc-CMPK2-5:51 
HGNC Gene Symbol: lnc-CMPK2-5    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1246
RefSeq ID: NR_110498
Location (hg38): chr2:6626109-6634706
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 543 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110498; NR_110498.1
Alternative gene names: LINC01246


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -744.0895 non-coding 
CPAT coding probability 4.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-5:51 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CMPK2-5:51
4.0 lnc-CMPK2-5:51
4.1 lnc-CMPK2-5:51
5.0 lnc-CMPK2-5:51
5.1 lnc-RAD51AP2-155:72
5.2 lnc-CMPK2-5:51