Transcript: lnc-CNIH3-2:11

Basic information

LNCipedia transcript ID: lnc-CNIH3-2:11 
LNCipedia gene ID: lnc-CNIH3-2
Location (hg38): chr1:224515694-224521222
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 406 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT139933
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -70.6331 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNIH3-2:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CNIH3-2:11
4.0 lnc-CNIH3-2:11
4.1 lnc-CNIH3-2:11
5.0 lnc-CNIH3-2:11
5.1 lnc-CAPN2-24:12
5.2 lnc-CNIH3-2:11