Transcript: lnc-CNKSR2-2:2

Basic information

LNCipedia transcript ID: lnc-CNKSR2-2:2 
LNCipedia gene ID: lnc-CNKSR2-2
Ensembl Gene ID: ENSG00000283400
Ensembl Transcript ID: ENST00000636971
Location (hg38): chrX:20443326-20492349
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 567 bp
Exons: 4
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636971.1
Alternative gene names: ENSG00000283400.1; RP11-203E14.1; AL807740.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.7942 non-coding 
CPAT coding probability 3.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNKSR2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CNKSR2-2:2
5.0 lnc-CNKSR2-2:2
5.1 lnc-GK-93:1
5.2 lnc-CNKSR2-2:2