Transcript: lnc-CNNM3-1:1

Basic information

LNCipedia transcript ID: lnc-CNNM3-1:1 
LNCipedia gene ID: lnc-CNNM3-1
Location (hg38): chr2:96919106-96925836
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2259 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000500585
Alternative gene names: ENSG00000246515; AC092636.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.054 non-coding 
CPAT coding probability 17.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNNM3-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CNNM3-1:1
3.1 lnc-CNNM3-1:1
4.0 lnc-CNNM3-1:1
4.1 lnc-CNNM3-1:1
5.0 lnc-CNNM3-1:1
5.1 lnc-SLC9A4-110:1
5.2 lnc-CNNM3-1:1