Transcript: lnc-CNNM3-3:2

Basic information

LNCipedia transcript ID: lnc-CNNM3-3:2 
LNCipedia gene ID: lnc-CNNM3-3
Location (hg38): chr2:96872088-96873370
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1283 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1681:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.2907 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNNM3-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CNNM3-3:2
4.1 lnc-CNNM3-3:2
5.0 lnc-CNNM3-3:2
5.1 lnc-SLC9A4-111:2
5.2 lnc-CNNM3-3:2