Transcript: lnc-CNPY1-2:38

Basic information

LNCipedia transcript ID: lnc-CNPY1-2:38 
LNCipedia gene ID: lnc-CNPY1-2
Location (hg38): chr7:155479223-155484403
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1719 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT124378
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3328 non-coding 
CPAT coding probability 12.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNPY1-2:38 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BLACE-3:2
4.0 lnc-BLACE-3:2
4.1 lnc-AC009403.2.1-2:16
5.0 lnc-AC009403.2.1-2:16
5.1 lnc-CNPY1-2:21
5.2 lnc-CNPY1-2:38