Transcript: lnc-CNPY1-3:4

Basic information

LNCipedia transcript ID: lnc-CNPY1-3:4 
LNCipedia gene ID: lnc-CNPY1-3
Location (hg38): chr7:155270276-155277882
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 998 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014020; NONHSAT124365
Alternative gene names: XLOC_006664; linc-PAXIP1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.1084 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNPY1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC099552.4.1-3:1
3.1 lnc-AC099552.4.1-3:1
4.0 lnc-AC099552.4.1-3:1
4.1 lnc-AC099552.4.1-3:1
5.0 lnc-AC099552.4.1-3:1
5.1 lnc-CNPY1-3:2
5.2 lnc-CNPY1-3:4