Transcript: lnc-CNST-1:4

Basic information

LNCipedia transcript ID: lnc-CNST-1:4 
LNCipedia gene ID: lnc-CNST-1
Location (hg38): chr1:246689721-246691821
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1090 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT010718; FPKM1_group_2724_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.2642 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CNST-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CNST-1:4
4.0 lnc-CNST-1:4
4.1 lnc-CNST-1:4
5.0 lnc-CNST-1:4
5.1 lnc-OR2G3-15:3
5.2 lnc-CNST-1:4