Transcript: lnc-COA3-3:2

Basic information

LNCipedia transcript ID: lnc-COA3-3:2 
LNCipedia gene ID: lnc-COA3-3
Location (hg38): chr17:42771353-42773371
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2019 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033710.1|ENCT00000183960.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.2551 non-coding 
CPAT coding probability 4.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COA3-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC100793.1-2:2
5.0 lnc-AC100793.1-2:2
5.1 lnc-BRCA1-11:2
5.2 lnc-COA3-3:2