Transcript: lnc-COG5-2:8

Basic information

LNCipedia transcript ID: lnc-COG5-2:8 
LNCipedia gene ID: lnc-COG5-2
Location (hg38): chr7:107071601-107079605
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 439 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243193.2|ENCT00000416010.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -130.2713 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COG5-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-COG5-2:8
5.0 lnc-COG5-2:8
5.1 lnc-NRCAM-19:8
5.2 lnc-COG5-2:8