Transcript: lnc-COG7-1:1

Basic information

LNCipedia transcript ID: lnc-COG7-1:1 
LNCipedia gene ID: lnc-COG7-1
Location (hg38): chr16:23463616-23465337
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1722 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000568163.1; CTD-2270L9.5-001; OTTHUMT00000436064.1; NONHSAT141113
Alternative gene names: ENSG00000260208.1; CTD-2270L9.5; OTTHUMG00000177264.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.7301 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COG7-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COG7-1:1
4.0 lnc-COG7-1:1
4.1 lnc-COG7-1:1
5.0 lnc-COG7-1:1
5.1 lnc-SULT1A2-182:1
5.2 lnc-COG7-1:1