Transcript: lnc-COIL-2:5

Basic information

LNCipedia transcript ID: lnc-COIL-2:5 
LNCipedia gene ID: lnc-COIL-2
Location (hg38): chr17:57084605-57085005
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 240 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026125; NONHSAT054881
Alternative gene names: XLOC_012530; linc-COIL-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COIL-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COIL-2:3
3.1 lnc-COIL-2:5
4.0 lnc-COIL-2:5
4.1 lnc-COIL-2:5
5.0 lnc-COIL-2:5
5.1 lnc-PTRH2-46:13
5.2 lnc-COIL-2:5