Transcript: lnc-COIL-2:6

Basic information

LNCipedia transcript ID: lnc-COIL-2:6 
LNCipedia gene ID: lnc-COIL-2
Location (hg38): chr17:57072421-57084639
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 238 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026124; NONHSAT054879
Alternative gene names: XLOC_012530; linc-COIL-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.0088 non-coding 
CPAT coding probability 10.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COIL-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COIL-2:4
3.1 lnc-COIL-2:6
4.0 lnc-COIL-2:6
4.1 lnc-COIL-2:6
5.0 lnc-COIL-2:6
5.1 lnc-PTRH2-46:14
5.2 lnc-COIL-2:6