Transcript: lnc-COL6A3-14:10

Basic information

LNCipedia transcript ID: lnc-COL6A3-14:10 
LNCipedia gene ID: lnc-COL6A3-14
Location (hg38): chr2:237041903-237085774
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1622 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227252.1|MICT00000210418.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.1237 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COL6A3-14:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-COL6A3-5:11
5.0 lnc-COL6A3-5:11
5.1 lnc-ASB18-5:10
5.2 lnc-COL6A3-14:10