Transcript: lnc-COL6A3-4:2

Basic information

LNCipedia transcript ID: lnc-COL6A3-4:2 
LNCipedia gene ID: lnc-COL6A3-4
Location (hg38): chr2:237122857-237158521
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2158 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT077623
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.3823 non-coding 
CPAT coding probability 9.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COL6A3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COL6A3-4:2
4.0 lnc-COL6A3-4:2
4.1 lnc-COL6A3-4:2
5.0 lnc-COL6A3-4:2
5.1 lnc-ASB18-7:1
5.2 lnc-COL6A3-4:2