Transcript: lnc-COMMD3-1:2

Basic information

LNCipedia transcript ID: lnc-COMMD3-1:2 
LNCipedia gene ID: lnc-COMMD3-1
RefSeq ID: NR_038921
Location (hg38): chr10:22252072-22258548
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6477 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT011733; NR_038921; NR_038921.1
Alternative gene names: LOC100130992


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.1891 non-coding 
CPAT coding probability 11.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COMMD3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COMMD3-1:2
4.0 lnc-COMMD3-1:2
4.1 lnc-COMMD3-1:2
5.0 lnc-COMMD3-1:2
5.1 lnc-NPY4R2-288:3
5.2 lnc-COMMD3-1:2