Transcript: lnc-COMMD6-8:1

Basic information

LNCipedia transcript ID: lnc-COMMD6-8:1 
LNCipedia gene ID: lnc-COMMD6-8
Ensembl Gene ID: ENSG00000225203
Ensembl Transcript ID: ENST00000440094
Location (hg38): chr13:75375511-75377294
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 425 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT034352; ENST00000440094.2
Alternative gene names: ENSG00000225203.2; TBC1D4-AS1; RP11-182M20.2; AL139230.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -270.2169 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COMMD6-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COMMD6-8:1
4.0 lnc-COMMD6-8:1
4.1 lnc-COMMD6-8:1
5.0 lnc-COMMD6-8:1
5.1 lnc-IRS2-170:1
5.2 lnc-COMMD6-8:1