Transcript: lnc-COPG1-3:8

Basic information

LNCipedia transcript ID: lnc-COPG1-3:8 
LNCipedia gene ID: lnc-COPG1-3
Location (hg38): chr3:129199137-129203400
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4264 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA973:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.8546 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COPG1-3:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-COPG-4:1
4.1 lnc-COPG-3:8
5.0 lnc-COPG-3:8
5.1 lnc-HMCES-9:8
5.2 lnc-COPG1-3:8