Transcript: lnc-COPG2-19:2

Basic information

LNCipedia transcript ID: lnc-COPG2-19:2 
LNCipedia gene ID: lnc-COPG2-19
Ensembl Gene ID: ENSG00000259920
Ensembl Transcript ID: ENST00000562524
Location (hg38): chr7:130481491-130484392
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2902 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562524.1; RP11-2E11.5-001; OTTHUMT00000422370.1; NONHSAT123348
Alternative gene names: ENSG00000259920.1; RP11-2E11.5; OTTHUMG00000173197.1; NCRNA00040; MEST-AS1; AC007938.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.309 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COPG2-19:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COPG2-2:1
4.0 MESTIT1:4
4.1 MESTIT1:4
5.0 MESTIT1:4
5.1 lnc-COPG2-6:2
5.2 lnc-COPG2-19:2