Transcript: lnc-COPS5-3:2

Basic information

LNCipedia transcript ID: lnc-COPS5-3:2 
LNCipedia gene ID: lnc-COPS5-3
Location (hg38): chr8:67061951-67083783
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 565 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT127076
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -180.719 non-coding 
CPAT coding probability 4.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-COPS5-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP1R42-3:1
4.0 lnc-COPS5-3:2
4.1 lnc-COPS5-3:2
5.0 lnc-COPS5-3:2
5.1 lnc-CPA6-7:1
5.2 lnc-COPS5-3:2