Transcript: lnc-COPS7A-1:1

Basic information

LNCipedia transcript ID: lnc-COPS7A-1:1 
LNCipedia gene ID: lnc-COPS7A-1
Ensembl Gene ID: ENSG00000270068
Ensembl Transcript ID: ENST00000602759
Location (hg38): chr12:6723233-6723687
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 455 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT026135; ENST00000602759.1
Alternative gene names: ENSG00000270068.1; RP4-761J14.9; AC125494.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.9231 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COPS7A-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COPS7A-1:1
4.0 lnc-COPS7A-1:1
4.1 lnc-COPS7A-1:1
5.0 lnc-COPS7A-1:1
5.1 lnc-CLEC4D-52:1
5.2 lnc-COPS7A-1:1