Transcript: lnc-COPZ2-1:5

Basic information

LNCipedia transcript ID: lnc-COPZ2-1:5 
LNCipedia gene ID: lnc-COPZ2-1
Location (hg38): chr17:48046892-48047472
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 343 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00025686
Alternative gene names: XLOC_012503; linc-COPZ2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -417.1695 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COPZ2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COPZ2-1:3
3.1 lnc-COPZ2-1:5
4.0 lnc-COPZ2-1:5
4.1 lnc-COPZ2-1:5
5.0 lnc-COPZ2-1:5
5.1 lnc-ZNF652-37:11
5.2 lnc-COPZ2-1:5