Transcript: lnc-COQ10B-2:1

Basic information

LNCipedia transcript ID: lnc-COQ10B-2:1 
LNCipedia gene ID: lnc-COQ10B-2
Ensembl Gene ID: ENSG00000231621
Ensembl Transcript ID: ENST00000449346
RefSeq ID: NR_135584
Location (hg38): chr2:197197991-197199273
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 455 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000449346.1; AC013264.2-001; OTTHUMT00000335180.1; NONHSAT076210; NR_135584.1
Alternative gene names: ENSG00000231621.1; AC013264.2; OTTHUMG00000154428.1; AC013264.1; LOC101927596


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.9512 non-coding 
CPAT coding probability 15.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COQ10B-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COQ10B-2:1
4.0 lnc-COQ10B-2:1
4.1 lnc-COQ10B-2:1
5.0 lnc-COQ10B-2:1
5.1 lnc-MAIP1-25:1
5.2 lnc-COQ10B-2:1