Transcript: lnc-COQ4-2:1

Basic information

LNCipedia transcript ID: lnc-COQ4-2:1 
LNCipedia gene ID: lnc-COQ4-2
Ensembl Gene ID: ENSG00000272696
Ensembl Transcript ID: ENST00000609315
Location (hg38): chr9:128316337-128316909
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 573 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609315.1
Alternative gene names: ENSG00000272696.1; RP11-339B21.13; AL359091.3; AL359091.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.1039 non-coding 
CPAT coding probability 5.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COQ4-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COQ4-2:1
4.0 lnc-COQ4-2:1
4.1 lnc-COQ4-2:1
5.0 lnc-COQ4-2:1
5.1 lnc-PTPA-56:1
5.2 lnc-COQ4-2:1