Transcript: lnc-COQ8A-1:1

Basic information

LNCipedia transcript ID: lnc-COQ8A-1:1 
LNCipedia gene ID: lnc-COQ8A-1
Ensembl Gene ID: ENSG00000233706
Ensembl Transcript ID: ENST00000433837
Location (hg38): chr1:226992140-226993206
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 440 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000433837.1; RP5-1087E8.3-001; OTTHUMT00000091708.1; NONHSAT009912
Alternative gene names: ENSG00000233706.1; RP5-1087E8.3; OTTHUMG00000037620.1; AL353689.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.3722 non-coding 
CPAT coding probability 6.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COQ8A-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ADCK3-1:1
4.0 lnc-ADCK3-1:1
4.1 lnc-ADCK3-1:1
5.0 lnc-ADCK3-1:1
5.1 lnc-ZNF678-22:1
5.2 lnc-COQ8A-1:1