Transcript: lnc-CORIN-1:1

Basic information

LNCipedia transcript ID: lnc-CORIN-1:1 
LNCipedia gene ID: lnc-CORIN-1
Ensembl Gene ID: ENSG00000259959
Ensembl Transcript ID: ENST00000563286
Location (hg38): chr4:47840122-47844339
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4218 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000563286.1; RP11-121C2.2-001; OTTHUMT00000431763.1; NONHSAT096268
Alternative gene names: ENSG00000259959.1; RP11-121C2.2; OTTHUMG00000176325.1; AC107068.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.8249 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CORIN-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CORIN-1:1
4.0 lnc-CORIN-1:1
4.1 lnc-CORIN-1:1
5.0 lnc-CORIN-1:1
5.1 lnc-COMMD8-4:2
5.2 lnc-CORIN-1:1