Transcript: lnc-COTL1-2:1

Basic information

LNCipedia transcript ID: lnc-COTL1-2:1 
LNCipedia gene ID: lnc-COTL1-2
Location (hg38): chr16:84778324-84784278
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1099 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: l_1376_chr16:84811929-84814167_76bGuttman_hLF
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.6748 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COTL1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COTL1-2:1
4.0 lnc-COTL1-2:1
4.1 lnc-COTL1-2:1
5.0 lnc-COTL1-2:1
5.1 lnc-MTHFSD-35:1
5.2 lnc-COTL1-2:1