Transcript: lnc-COX10-3:2

Basic information

LNCipedia transcript ID: lnc-COX10-3:2 
LNCipedia gene ID: lnc-COX10-3
RefSeq ID: NR_026880
Location (hg38): chr17:14303740-14305745
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2006 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT145765; NR_026880; NR_026880.1
Alternative gene names: MGC12916


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.7026 non-coding 
CPAT coding probability 3.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX10-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COX10-3:2
4.0 lnc-COX10-3:2
4.1 lnc-COX10-3:2
5.0 lnc-COX10-3:2
5.1 lnc-GLP2R-39:1
5.2 lnc-COX10-3:2