Transcript: lnc-COX11-2:5

Basic information

LNCipedia transcript ID: lnc-COX11-2:5 
LNCipedia gene ID: lnc-COX11-2
Location (hg38): chr17:54951467-54956518
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3504 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054790
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.3194 non-coding 
CPAT coding probability 49.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-COX11-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COX11-2:5
4.0 lnc-COX11-2:5
4.1 lnc-COX11-2:5
5.0 lnc-COX11-2:5
5.1 lnc-ANKRD40-27:3
5.2 lnc-COX11-2:5