Transcript: lnc-COX14-2:1

Basic information

LNCipedia transcript ID: lnc-COX14-2:1 
LNCipedia gene ID: lnc-COX14-2
Location (hg38): chr12:50112197-50165420
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 500 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT028170; ENST00000548468.1
Alternative gene names: ENSG00000272368.1; RP4-605O3.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.153 non-coding 
CPAT coding probability 2.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX14-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C12orf62-2:1
4.0 lnc-orphan.1-2:1
4.1 lnc-orphan.1-2:1
5.0 lnc-orphan.1-2:1
5.1 lnc-SMARCD1-3:1
5.2 lnc-COX14-2:1