Transcript: lnc-COX20-2:1

Basic information

LNCipedia transcript ID: lnc-COX20-2:1 
LNCipedia gene ID: lnc-COX20-2
Location (hg38): chr1:244864691-244865272
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 582 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273175.1|ENST00000610145.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.6878 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX20-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM36A-2:2
5.0 lnc-FAM36A-2:2
5.1 lnc-OR2G3-32:1
5.2 lnc-COX20-2:1